A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
/home/runner/work/pmultiqc/pmultiqc/data
pmultiqc
pmultiqc is a MultiQC module to show the pipeline performance of mass spectrometry based quantification pipelines such as nf-core/quantms, MaxQuant.URL: https://github.com/bigbio/pmultiqc
Summary and HeatMap
Summary Table
| #Peptides Quantified | #Proteins Quantified |
|---|---|
| 3725 | 765 |
Pipeline Result Statistics
| Sample Name | #Peptide IDs | #Unambiguous Peptide IDs | #Modified Peptide IDs | #Protein (group) IDs |
|---|---|---|---|---|
| 20221028_FL_Lu_SV_Set12_A1 | 2871 | 2871 | 402 | 793 |
| 20221028_FL_Lu_SV_Set12_A2 | 2877 | 2877 | 393 | 786 |
| 20221028_FL_Lu_SV_Set12_A3 | 2513 | 2513 | 336 | 688 |
| 20221028_FL_Lu_SV_Set12_A4 | 3001 | 3001 | 411 | 835 |
| 20221028_FL_Lu_SV_Set12_A5 | 2941 | 2941 | 413 | 818 |
| 20221028_FL_Lu_SV_Set12_A6 | 3020 | 3020 | 419 | 837 |
| 20221028_FL_Lu_SV_Set12_B1 | 2641 | 2641 | 350 | 759 |
| 20221028_FL_Lu_SV_Set12_B2 | 2766 | 2766 | 361 | 805 |
| 20221028_FL_Lu_SV_Set12_B3 | 3043 | 3043 | 408 | 888 |
| 20221028_FL_Lu_SV_Set12_B4 | 2887 | 2887 | 387 | 832 |
| 20221028_FL_Lu_SV_Set12_B5 | 2336 | 2336 | 313 | 669 |
| 20221028_FL_Lu_SV_Set12_B6 | 2517 | 2517 | 340 | 744 |
Identification Summary
Number of Peptides identified Per Protein
MS1 Analysis
Total Ion Chromatograms
MS1 Base Peak Chromatograms
MS1 Peaks
General stats for MS1 information
| File | Acquisition Date Time | log10(Total Current) | log10(Scan Current) |
|---|---|---|---|
| 20221028_FL_Lu_SV_Set12_A1 | 2022-10-29 22:11:31 | 11.7957 | 11.3888 |
| 20221028_FL_Lu_SV_Set12_A2 | 2022-10-30 01:33:52 | 11.8052 | 34.2775 |
| 20221028_FL_Lu_SV_Set12_A3 | 2022-10-30 13:47:37 | 11.7305 | 11.3256 |
| 20221028_FL_Lu_SV_Set12_A4 | 2022-10-30 06:40:43 | 11.8220 | 11.4029 |
| 20221028_FL_Lu_SV_Set12_A5 | 2022-10-30 09:03:01 | 11.8009 | 11.3846 |
| 20221028_FL_Lu_SV_Set12_A6 | 2022-10-30 01:56:09 | 11.8099 | 11.4013 |
| 20221028_FL_Lu_SV_Set12_B1 | 2022-10-29 12:42:17 | 11.7506 | 11.3651 |
| 20221028_FL_Lu_SV_Set12_B2 | 2022-10-30 11:25:17 | 11.8033 | 11.3784 |
| 20221028_FL_Lu_SV_Set12_B3 | 2022-10-29 15:04:34 | 11.8335 | 11.4320 |
| 20221028_FL_Lu_SV_Set12_B4 | 2022-10-30 04:18:27 | 11.8097 | 11.4051 |
| 20221028_FL_Lu_SV_Set12_B5 | 2022-10-29 17:26:54 | 11.6971 | 11.3046 |
| 20221028_FL_Lu_SV_Set12_B6 | 2022-10-29 19:49:11 | 11.7172 | 11.3146 |